When I use DaisyDisk to look at mobile documents, I see that there are 107 GB of files in Devonthink. Is this normal for a set of databases that add up to about 7GB?
I’m not worried about iCloud storage limits. I am just trying to see why 100GB of my SSD are taken up with this.
You cannot gauge this by the size of the .dtBase2 files.
They contain internal metadata about the database, not just files.
In the case of indexed files, the contents aren’t included. You need to look at File > Database Properties to see the size of the contents of the database.
When you synchronize indexed files, they contents are synced by default - and yes, this is by design. The contents of those indexed files are synchronized.
Check out the built-in Help > Documentation > In & Out > Sync > Indexing and Sync section…
Note we don’t have full control of our local directory in iCloud, as iCloud can download items to it as it sees fit. But you can control-click the sync location in DEVONthink’s Preferences > Sync, hold the Option key, and choose Verify Location Thoroughly. This will check the sync data and evict it, if possible.